Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 CLUHP2-201ENST00000426660 1303 ntBASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 GGT3P-204ENST00000453783 1664 ntBASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 AC053503.3-201ENST00000448375 114 ntBASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 RN7SL846P-201ENST00000467429 292 ntBASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 AC106047.2-201ENST00000511723 743 ntBASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 AC011471.3-201ENST00000623576 402 ntBASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 AL592424.1-201ENST00000563624 1536 ntBASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 LINC01144-201ENST00000626198 1710 ntBASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC24.47■■□□□ 1.51
RIMBP3Q9UFD9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AC078875.1-201ENST00000431907 724 ntBASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AL592076.1-201ENST00000424448 303 ntBASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 AC006548.2-201ENST00000605217 529 ntBASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 MBLAC2-202ENST00000514906 1936 ntBASIC24.46■■□□□ 1.51
RIMBP3Q9UFD9 FRMPD2B-201ENST00000431305 1347 ntBASIC24.45■■□□□ 1.51
RIMBP3Q9UFD9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RIMBP3Q9UFD9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC24.45■■□□□ 1.51
RIMBP3Q9UFD9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC24.45■■□□□ 1.51
RIMBP3Q9UFD9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
RIMBP3Q9UFD9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.51
RIMBP3Q9UFD9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 AC008805.1-201ENST00000590892 364 ntBASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RIMBP3Q9UFD9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 JPT2-203ENST00000382711 894 ntTSL 4 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RIMBP3Q9UFD9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms