Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AP005117.1-201ENST00000584346 1413 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC016734.2-201ENST00000624325 1377 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC129492.6-201ENST00000611383 1305 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 KRT18P57-201ENST00000443599 1254 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 TOB2P1-201ENST00000469761 992 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC107918.2-201ENST00000530817 355 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC092329.2-201ENST00000598402 547 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AL139288.1-201ENST00000623748 933 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC133561.5-201ENST00000635547 218 ntBASIC15.53■□□□□ 0.08
NDE1Q9NXR1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.53■□□□□ 0.08
NDE1Q9NXR1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 AC126335.2-201ENST00000623362 4637 ntBASIC15.52■□□□□ 0.08
NDE1Q9NXR1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 TPSP2-201ENST00000561760 610 ntBASIC15.52■□□□□ 0.08
NDE1Q9NXR1 AC139887.3-201ENST00000568585 713 ntBASIC15.52■□□□□ 0.08
NDE1Q9NXR1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.52■□□□□ 0.08
NDE1Q9NXR1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 AL137784.3-201ENST00000623858 2288 ntBASIC15.52■□□□□ 0.07
NDE1Q9NXR1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 AC041040.2-201ENST00000622926 2899 ntBASIC15.52■□□□□ 0.07
NDE1Q9NXR1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NDE1Q9NXR1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
NDE1Q9NXR1 AL365330.1-201ENST00000607459 531 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms