Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 AC004832.2-201ENST00000426397 482 ntBASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 AC074386.1-202ENST00000463561 864 ntBASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIN7CQ9NUP9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 AC020658.6-201ENST00000623564 1870 ntBASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LIN7CQ9NUP9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 DNAJB3-201ENST00000446806 729 ntBASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 MTDHP5-201ENST00000598980 586 ntBASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AC068137.2-201ENST00000605408 478 ntBASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AL365330.1-201ENST00000607459 531 ntBASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 AP003680.1-201ENST00000598970 3660 ntBASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 SSR4P1-203ENST00000599569 2260 ntBASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.33□□□□□ -0.28
LIN7CQ9NUP9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms