Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 AC105250.1-201ENST00000509378 2057 ntBASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 KRT18P34-201ENST00000488218 1270 ntBASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 AC109635.5-201ENST00000533593 962 ntBASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXP3Q9BZS1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXP3Q9BZS1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
FOXP3Q9BZS1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXP3Q9BZS1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXP3Q9BZS1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.52■□□□□ 0.23
FOXP3Q9BZS1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
FOXP3Q9BZS1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC067930.6-201ENST00000623257 4947 ntBASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AL139400.1-201ENST00000366220 510 ntBASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXP3Q9BZS1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 AC138035.3-201ENST00000622706 2791 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms