Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SAR1AP4-201ENST00000429225 591 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 MTND1P32-201ENST00000433043 938 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC006004.1-201ENST00000434887 2145 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC093155.1-201ENST00000440164 826 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 RPS6P2-201ENST00000454208 705 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008379.1-201ENST00000463655 464 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SLC25A14P1-201ENST00000502867 901 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AGXT2-204ENST00000510428 1561 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 BMPR1APS2-201ENST00000527904 1012 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC105275.2-201ENST00000567907 711 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC007923.3-201ENST00000578645 292 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC006116.8-202ENST00000587620 1550 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 IGHV3-72-202ENST00000621503 303 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 SF1-220ENST00000626028 704 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 AC055733.4-201ENST00000638462 1354 ntBASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-3Q9BYR6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AL451064.2-201ENST00000623514 1654 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 KIR2DL1-202ENST00000336077 1596 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 BX005040.4-201ENST00000637145 1518 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 Y_RNA.160-201ENST00000363677 92 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 RNU2-3P-201ENST00000410144 191 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC017019.1-201ENST00000426129 261 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 DNAJC19P4-201ENST00000440115 345 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 EIF4E2P2-201ENST00000492033 736 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC093890.1-201ENST00000502554 540 ntBASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms