Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC3Q9BY71 REXO1L1P-202ENST00000608646 1974 ntBASIC16.58■□□□□ 0.25
LRRC3Q9BY71 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRRC3Q9BY71 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 MIR658-201ENST00000385210 100 ntBASIC16.58■□□□□ 0.24
LRRC3Q9BY71 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 FAM86LP-201ENST00000478302 853 ntBASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 SNX29P1-201ENST00000548357 1007 ntBASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.58■□□□□ 0.24
LRRC3Q9BY71 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LRRC3Q9BY71 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 RPS2P32-201ENST00000439199 892 ntBASIC16.57■□□□□ 0.24
LRRC3Q9BY71 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 AC015936.2-201ENST00000593177 259 ntBASIC16.57■□□□□ 0.24
LRRC3Q9BY71 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 PCDH8P1-201ENST00000428983 2773 ntBASIC16.57■□□□□ 0.24
LRRC3Q9BY71 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRRC3Q9BY71 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 CROCCP4-201ENST00000457096 498 ntBASIC16.56■□□□□ 0.24
LRRC3Q9BY71 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 AL450472.2-201ENST00000603663 1156 ntBASIC16.56■□□□□ 0.24
LRRC3Q9BY71 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.56■□□□□ 0.24
LRRC3Q9BY71 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRRC3Q9BY71 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms