Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 AC023141.13-201ENST00000604991 943 ntBASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 AP001282.1-201ENST00000531301 1499 ntBASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.53□□□□□ -0.24
HDHD3Q9BSH5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 CICP24-201ENST00000605464 2705 ntBASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HDHD3Q9BSH5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 MRPL3P1-201ENST00000400109 1033 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 GPX1P2-201ENST00000429271 606 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AC140658.5-201ENST00000438532 169 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 PRYP6-201ENST00000514804 343 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AC018845.2-201ENST00000568326 409 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 PMS2P7-201ENST00000506558 1336 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AC025580.3-201ENST00000617932 1424 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 AL161772.1-201ENST00000610494 4412 ntBASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HDHD3Q9BSH5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 C18orf15-201ENST00000623680 2534 ntBASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 TCAF2P1-201ENST00000291129 2421 ntBASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 AC112693.3-201ENST00000624819 1983 ntBASIC13.51□□□□□ -0.25
HDHD3Q9BSH5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms