Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 SPTLC1P5-201ENST00000450718 252 ntBASIC18.01■□□□□ 0.47
PTPN18Q99952 RN7SL720P-201ENST00000488178 304 ntBASIC18.01■□□□□ 0.47
PTPN18Q99952 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN18Q99952 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PTPN18Q99952 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 AP001505.2-201ENST00000616815 443 ntBASIC18.01■□□□□ 0.47
PTPN18Q99952 BX539320.1-201ENST00000623759 877 ntBASIC18.01■□□□□ 0.47
PTPN18Q99952 AC106820.2-201ENST00000563775 3264 ntBASIC18.01■□□□□ 0.47
PTPN18Q99952 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN18Q99952 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTPN18Q99952 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN18Q99952 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 AL354989.2-201ENST00000435838 1540 ntBASIC18■□□□□ 0.47
PTPN18Q99952 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
PTPN18Q99952 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18■□□□□ 0.47
PTPN18Q99952 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 ACTBP8-201ENST00000403258 1108 ntBASIC18■□□□□ 0.47
PTPN18Q99952 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18■□□□□ 0.47
PTPN18Q99952 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18■□□□□ 0.47
PTPN18Q99952 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18■□□□□ 0.47
PTPN18Q99952 FTLP10-202ENST00000505798 471 ntBASIC18■□□□□ 0.47
PTPN18Q99952 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 AC245884.6-201ENST00000515672 1067 ntBASIC18■□□□□ 0.47
PTPN18Q99952 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18■□□□□ 0.47
PTPN18Q99952 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18■□□□□ 0.47
PTPN18Q99952 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18■□□□□ 0.47
PTPN18Q99952 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PTPN18Q99952 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18■□□□□ 0.47
PTPN18Q99952 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PTPN18Q99952 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18■□□□□ 0.47
PTPN18Q99952 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN18Q99952 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN18Q99952 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN18Q99952 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN18Q99952 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PTPN18Q99952 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN18Q99952 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.99■□□□□ 0.47
PTPN18Q99952 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.99■□□□□ 0.47
PTPN18Q99952 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.99■□□□□ 0.47
PTPN18Q99952 KLF2P2-201ENST00000416807 1039 ntBASIC17.99■□□□□ 0.47
PTPN18Q99952 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PTPN18Q99952 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.99■□□□□ 0.47
PTPN18Q99952 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.99■□□□□ 0.47
PTPN18Q99952 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.99■□□□□ 0.47
PTPN18Q99952 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN18Q99952 RN7SL48P-201ENST00000579283 293 ntBASIC17.99■□□□□ 0.47
PTPN18Q99952 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN18Q99952 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.99■□□□□ 0.47
PTPN18Q99952 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
PTPN18Q99952 CU633904.3-201ENST00000624042 1029 ntBASIC17.99■□□□□ 0.47
PTPN18Q99952 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN18Q99952 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN18Q99952 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms