Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 SDHAP3-202ENST00000515467 728 ntBASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 ZNF890P-202ENST00000530367 1156 ntBASIC16.44■□□□□ 0.22
RPRD1AQ96P16 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AL450472.2-201ENST00000603663 1156 ntBASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AC008738.7-201ENST00000609744 511 ntBASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AL109936.8-201ENST00000641772 604 ntBASIC16.44■□□□□ 0.22
RPRD1AQ96P16 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 AC010491.1-201ENST00000563101 2797 ntBASIC16.44■□□□□ 0.22
RPRD1AQ96P16 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
RPRD1AQ96P16 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 AC018892.3-201ENST00000623986 2499 ntBASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PHKG1P2-201ENST00000457537 863 ntBASIC16.43■□□□□ 0.22
RPRD1AQ96P16 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 MST1L-201ENST00000442552 2185 ntBASIC16.43■□□□□ 0.22
RPRD1AQ96P16 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPRD1AQ96P16 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.42■□□□□ 0.22
RPRD1AQ96P16 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AC026691.1-201ENST00000602502 2017 ntBASIC16.42■□□□□ 0.22
RPRD1AQ96P16 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AC135586.1-201ENST00000539323 574 ntBASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AC025048.3-201ENST00000590609 569 ntBASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RPRD1AQ96P16 AC005702.4-201ENST00000618393 416 ntBASIC16.42■□□□□ 0.22
RPRD1AQ96P16 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms