Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 AP002383.4-201ENST00000442518 975 ntBASIC13.78□□□□□ -0.2
CMTM3Q96MX0 KRT18P21-201ENST00000515767 1272 ntBASIC13.78□□□□□ -0.2
CMTM3Q96MX0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 AC012615.1-201ENST00000565797 1299 ntBASIC13.78□□□□□ -0.2
CMTM3Q96MX0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 RN7SL850P-201ENST00000579959 291 ntBASIC13.78□□□□□ -0.2
CMTM3Q96MX0 AP002414.4-201ENST00000589764 1148 ntBASIC13.78□□□□□ -0.2
CMTM3Q96MX0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMTM3Q96MX0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.77□□□□□ -0.2
CMTM3Q96MX0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.77□□□□□ -0.2
CMTM3Q96MX0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AC132008.2-207ENST00000454517 770 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AL031055.1-201ENST00000606362 631 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AC023024.2-201ENST00000623561 1993 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AC009090.5-201ENST00000624886 2285 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AC134407.2-201ENST00000625089 1978 ntBASIC13.77□□□□□ -0.21
CMTM3Q96MX0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CMTM3Q96MX0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 BEND3P1-201ENST00000421591 1944 ntBASIC13.76□□□□□ -0.21
CMTM3Q96MX0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.76□□□□□ -0.21
CMTM3Q96MX0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CMTM3Q96MX0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms