Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 AJ011931.1-201ENST00000618749 2492 ntBASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 SLC22A20-204ENST00000530038 1673 ntBASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 HAUS4P1-201ENST00000406739 1145 ntBASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 AL591684.3-201ENST00000605187 298 ntBASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP6Q96FZ7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 PMS2P1-201ENST00000431037 1228 ntBASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 FOSL1P1-201ENST00000511041 816 ntBASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHMP6Q96FZ7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHMP6Q96FZ7 KRT8P44-201ENST00000441609 1350 ntBASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP6Q96FZ7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms