Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM54Q969K7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM54Q969K7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 AC046158.3-201ENST00000624947 2558 ntBASIC14.02□□□□□ -0.17
TMEM54Q969K7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TMEM54Q969K7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.17
TMEM54Q969K7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM54Q969K7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 CICP6-201ENST00000457191 2729 ntBASIC14.01□□□□□ -0.17
TMEM54Q969K7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.01□□□□□ -0.17
TMEM54Q969K7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 TARDBPP1-201ENST00000442013 1203 ntBASIC14.01□□□□□ -0.17
TMEM54Q969K7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 AL158211.3-201ENST00000607385 239 ntBASIC14.01□□□□□ -0.17
TMEM54Q969K7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM54Q969K7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM54Q969K7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14□□□□□ -0.17
TMEM54Q969K7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14□□□□□ -0.17
TMEM54Q969K7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC092850.2-201ENST00000623821 2697 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms