Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
DDX1Q92499 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DDX1Q92499 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.97■□□□□ 0.31
DDX1Q92499 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
DDX1Q92499 PKD1P1-201ENST00000458669 6805 ntBASIC16.96■□□□□ 0.31
DDX1Q92499 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 LINC00554-201ENST00000564841 3011 ntBASIC16.96■□□□□ 0.31
DDX1Q92499 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.96■□□□□ 0.31
DDX1Q92499 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
DDX1Q92499 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.96■□□□□ 0.31
DDX1Q92499 AZGP1P1-201ENST00000411909 902 ntBASIC16.96■□□□□ 0.31
DDX1Q92499 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
DDX1Q92499 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.96■□□□□ 0.31
DDX1Q92499 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DDX1Q92499 AP005018.1-201ENST00000525475 301 ntBASIC16.96■□□□□ 0.31
DDX1Q92499 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.96■□□□□ 0.31
DDX1Q92499 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.96■□□□□ 0.31
DDX1Q92499 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.96■□□□□ 0.31
DDX1Q92499 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.96■□□□□ 0.31
DDX1Q92499 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.96■□□□□ 0.31
DDX1Q92499 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DDX1Q92499 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
DDX1Q92499 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.96■□□□□ 0.3
DDX1Q92499 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
DDX1Q92499 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
DDX1Q92499 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DDX1Q92499 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.96■□□□□ 0.3
DDX1Q92499 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.96■□□□□ 0.3
DDX1Q92499 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.96■□□□□ 0.3
DDX1Q92499 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
DDX1Q92499 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.96■□□□□ 0.3
DDX1Q92499 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
DDX1Q92499 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
DDX1Q92499 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.96■□□□□ 0.3
DDX1Q92499 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DDX1Q92499 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
DDX1Q92499 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 MIR4453-201ENST00000584019 89 ntBASIC16.95■□□□□ 0.3
DDX1Q92499 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 RN7SL828P-201ENST00000607615 303 ntBASIC16.95■□□□□ 0.3
DDX1Q92499 AC003101.2-201ENST00000612557 442 ntBASIC16.95■□□□□ 0.3
DDX1Q92499 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.95■□□□□ 0.3
DDX1Q92499 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
DDX1Q92499 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DDX1Q92499 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms