Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 KRT16P4-201ENST00000453883 522 ntBASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 AP002469.2-201ENST00000531724 424 ntBASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 MIR4321-201ENST00000592276 80 ntBASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 AL358472.4-201ENST00000633140 710 ntBASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKAP2Q8WWK9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 MIR3909-201ENST00000579518 119 ntBASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 MIR4313-201ENST00000580760 101 ntBASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 MTDHP4-201ENST00000600287 670 ntBASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 AC069148.1-201ENST00000608741 768 ntBASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 AC116407.4-201ENST00000623319 1061 ntBASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.89■□□□□ 0.13
CKAP2Q8WWK9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.88■□□□□ 0.13
CKAP2Q8WWK9 FAM86EP-206ENST00000510506 987 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms