Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
ALMS1Q8TCU4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AC097065.1-201ENST00000425737 517 ntBASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 DNM1P30-201ENST00000563586 452 ntBASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AL133267.1-201ENST00000398220 340 ntBASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AC098935.1-201ENST00000446057 611 ntBASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
ALMS1Q8TCU4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 TMCO5B-205ENST00000530020 894 ntBASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 NOC2LP2-201ENST00000407594 1944 ntBASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AL133466.1-201ENST00000447582 150 ntBASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 AC079112.1-201ENST00000454972 939 ntBASIC10.47□□□□□ -0.73
ALMS1Q8TCU4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms