Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 AC020658.6-201ENST00000623564 1870 ntBASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 HLA-A-201ENST00000376802 1334 ntBASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS37AQ8NEZ2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 AC098859.1-201ENST00000502915 1238 ntBASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 TMBIM7P-203ENST00000641617 1718 ntBASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS37AQ8NEZ2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS37AQ8NEZ2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms