Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AL359183.1-201ENST00000623796 2132 ntBASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 POLD2P1-201ENST00000511220 997 ntBASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 IGHV3-62-201ENST00000520057 340 ntBASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
LSMEM1Q8N8F7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RPS8P6-201ENST00000426177 609 ntBASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 HTR5BP-201ENST00000430851 1154 ntBASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RNA5SP410-201ENST00000516285 106 ntBASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.66□□□□□ -0.06
LSMEM1Q8N8F7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms