Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 FAM185BP-201ENST00000443595 716 ntBASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 AC108073.2-201ENST00000464002 357 ntBASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 KRT18P56-201ENST00000507275 550 ntBASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 MIR3909-201ENST00000579518 119 ntBASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 TP73-AS1-207ENST00000624167 988 ntBASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIML2Q8N7C3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PMS2P4-201ENST00000412466 1052 ntBASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PRSS29P-201ENST00000440800 595 ntBASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 AL160237.2-201ENST00000556165 472 ntBASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 AC004790.2-201ENST00000623588 572 ntBASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 AL645728.2-201ENST00000641974 660 ntBASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 AL592424.1-201ENST00000563624 1536 ntBASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIML2Q8N7C3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 AP002414.3-201ENST00000589352 1468 ntBASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIML2Q8N7C3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms