Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PROM2Q8N271 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PROM2Q8N271 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.08■□□□□ 0.81
PROM2Q8N271 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PROM2Q8N271 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PROM2Q8N271 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.08■□□□□ 0.81
PROM2Q8N271 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.08■□□□□ 0.81
PROM2Q8N271 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.08■□□□□ 0.81
PROM2Q8N271 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PROM2Q8N271 RN7SL11P-201ENST00000471305 293 ntBASIC20.08■□□□□ 0.81
PROM2Q8N271 NUP210P1-202ENST00000504322 710 ntBASIC20.08■□□□□ 0.81
PROM2Q8N271 AC022217.1-201ENST00000521069 738 ntBASIC20.08■□□□□ 0.81
PROM2Q8N271 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.08■□□□□ 0.81
PROM2Q8N271 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PROM2Q8N271 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.08■□□□□ 0.81
PROM2Q8N271 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.08■□□□□ 0.81
PROM2Q8N271 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.08■□□□□ 0.81
PROM2Q8N271 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PROM2Q8N271 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PROM2Q8N271 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PROM2Q8N271 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PROM2Q8N271 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
PROM2Q8N271 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PROM2Q8N271 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 HLA-A-202ENST00000376806 1854 ntBASIC20.07■□□□□ 0.8
PROM2Q8N271 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PROM2Q8N271 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.07■□□□□ 0.8
PROM2Q8N271 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PROM2Q8N271 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PROM2Q8N271 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.07■□□□□ 0.8
PROM2Q8N271 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
PROM2Q8N271 AC005730.2-201ENST00000564549 1184 ntBASIC20.07■□□□□ 0.8
PROM2Q8N271 AC073352.2-201ENST00000609385 439 ntBASIC20.07■□□□□ 0.8
PROM2Q8N271 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.07■□□□□ 0.8
PROM2Q8N271 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.07■□□□□ 0.8
PROM2Q8N271 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.07■□□□□ 0.8
PROM2Q8N271 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PROM2Q8N271 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PROM2Q8N271 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PROM2Q8N271 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.06■□□□□ 0.8
PROM2Q8N271 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 CRCP-204ENST00000398684 492 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 ACTG1P2-201ENST00000415776 1125 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 ACTG1P11-201ENST00000425411 1125 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 AC007919.2-201ENST00000444110 511 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 Z97180.1-201ENST00000445173 988 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC20.06■□□□□ 0.8
PROM2Q8N271 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC20.06■□□□□ 0.8
PROM2Q8N271 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.06■□□□□ 0.8
PROM2Q8N271 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.06■□□□□ 0.8
PROM2Q8N271 AC244157.2-201ENST00000616239 1006 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 AC022960.2-201ENST00000616300 666 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PROM2Q8N271 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.06■□□□□ 0.8
PROM2Q8N271 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PROM2Q8N271 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 PP12613-201ENST00000424958 2230 ntBASIC20.06■□□□□ 0.8
PROM2Q8N271 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PROM2Q8N271 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.06■□□□□ 0.8
PROM2Q8N271 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.05■□□□□ 0.8
PROM2Q8N271 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.05■□□□□ 0.8
PROM2Q8N271 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms