Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 POM121L10P-201ENST00000436994 1285 ntBASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 PPY2P-201ENST00000582808 702 ntBASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 NDUFV2P1-201ENST00000596415 907 ntBASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AC025181.2-201ENST00000606994 802 ntBASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL27A1Q8IZC6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC016700.1-201ENST00000429424 312 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 NKAIN1P1-201ENST00000435754 582 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC005077.2-201ENST00000449786 690 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC022217.1-201ENST00000521069 738 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC016629.1-201ENST00000596579 586 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC015818.8-201ENST00000587907 1519 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 RN7SL48P-201ENST00000579283 293 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC020914.3-201ENST00000594712 304 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AC138627.1-207ENST00000641560 1006 ntBASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL27A1Q8IZC6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 ENPP7P14-201ENST00000621765 1040 ntBASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
COL27A1Q8IZC6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms