Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LRRTM1Q86UE6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC067930.6-201ENST00000623257 4947 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC104581.4-201ENST00000623126 3052 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 RNPS1P1-201ENST00000507437 918 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC073648.2-201ENST00000510116 352 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC109635.5-201ENST00000533593 962 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC012640.2-201ENST00000561606 901 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CICP4-201ENST00000447359 2812 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 AC073439.1-201ENST00000624121 1774 ntBASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRTM1Q86UE6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 AL078644.1-201ENST00000609881 752 ntBASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRTM1Q86UE6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms