Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AC113347.1-201ENST00000413321 391 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AC087499.1-201ENST00000418141 1075 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AL137013.1-201ENST00000432946 1228 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AC011840.4-201ENST00000578471 627 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 MIR4492-201ENST00000581627 80 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AL353801.3-201ENST00000609898 542 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AL592071.1-201ENST00000611956 408 ntBASIC13.35□□□□□ -0.27
ZNF546Q86UE3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF546Q86UE3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AC140479.7-201ENST00000636301 2332 ntBASIC13.34□□□□□ -0.27
ZNF546Q86UE3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AC092127.1-201ENST00000567093 3455 ntBASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 RNF152P1-201ENST00000397754 604 ntBASIC13.34□□□□□ -0.27
ZNF546Q86UE3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AC092647.4-201ENST00000457211 535 ntBASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AC020765.3-201ENST00000613051 740 ntBASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AC073592.5-201ENST00000624854 528 ntBASIC13.34□□□□□ -0.27
ZNF546Q86UE3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
ZNF546Q86UE3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 AC005622.1-201ENST00000636801 1703 ntBASIC13.33□□□□□ -0.27
ZNF546Q86UE3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.33□□□□□ -0.27
ZNF546Q86UE3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF546Q86UE3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms