Protein–RNA interactions for Protein: Q86TJ5

ZNF554, Zinc finger protein 554, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554Q86TJ5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 FAM220CP-201ENST00000395253 831 ntBASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC007967.3-201ENST00000434308 558 ntBASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 KRT8P26-201ENST00000534154 1276 ntBASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC111152.3-201ENST00000569699 673 ntBASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC011840.4-201ENST00000578471 627 ntBASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AL592071.1-201ENST00000611956 408 ntBASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF554Q86TJ5 AC087481.3-201ENST00000602886 1894 ntBASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF554Q86TJ5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 HLA-J-202ENST00000469281 1241 ntBASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 VENTXP7-201ENST00000475503 772 ntBASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 AL121956.5-201ENST00000625261 221 ntBASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF554Q86TJ5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF554Q86TJ5 HSPA7-201ENST00000445535 1927 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms