Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 KLF2P2-201ENST00000416807 1039 ntBASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 U62317.3-201ENST00000608319 855 ntBASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 AP001094.4-201ENST00000579008 2176 ntBASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
KRT28Q7Z3Y7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 AL645608.8-201ENST00000606034 2086 ntBASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 AC106820.2-201ENST00000563775 3264 ntBASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 TPM3P8-201ENST00000330554 643 ntBASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 RNU1-114P-201ENST00000365297 166 ntBASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT28Q7Z3Y7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 NKAIN1P1-201ENST00000435754 582 ntBASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 RPS2P36-201ENST00000456516 831 ntBASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 RN7SL48P-201ENST00000579283 293 ntBASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 SPCS2P2-201ENST00000603270 608 ntBASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT28Q7Z3Y7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 FZD10-202ENST00000539839 3282 ntBASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 MIR5572-201ENST00000583188 137 ntBASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 AC091812.3-201ENST00000621362 345 ntBASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 AC128714.1-201ENST00000637035 887 ntBASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms