Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAPH1Q70E73 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAPH1Q70E73 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAPH1Q70E73 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAPH1Q70E73 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAPH1Q70E73 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.13■□□□□ 0.17
RAPH1Q70E73 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAPH1Q70E73 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 AL009178.2-201ENST00000597278 2719 ntBASIC16.12■□□□□ 0.17
RAPH1Q70E73 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 AC006058.4-201ENST00000624016 1670 ntBASIC16.12■□□□□ 0.17
RAPH1Q70E73 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.12■□□□□ 0.17
RAPH1Q70E73 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 AC073439.1-201ENST00000624121 1774 ntBASIC16.12■□□□□ 0.17
RAPH1Q70E73 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 BCAR1-209ENST00000546196 1340 ntBASIC16.12■□□□□ 0.17
RAPH1Q70E73 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 FAM45BP-202ENST00000592932 1624 ntBASIC16.12■□□□□ 0.17
RAPH1Q70E73 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.12■□□□□ 0.17
RAPH1Q70E73 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAPH1Q70E73 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 AC025580.3-201ENST00000617932 1424 ntBASIC16.11■□□□□ 0.17
RAPH1Q70E73 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.11■□□□□ 0.17
RAPH1Q70E73 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 AC140658.5-201ENST00000438532 169 ntBASIC16.11■□□□□ 0.17
RAPH1Q70E73 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 AL662844.1-201ENST00000546340 181 ntBASIC16.11■□□□□ 0.17
RAPH1Q70E73 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 Z83851.2-201ENST00000609564 659 ntBASIC16.11■□□□□ 0.17
RAPH1Q70E73 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAPH1Q70E73 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAPH1Q70E73 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms