Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 BASP1P1-201ENST00000430708 665 ntBASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 MTND6P24-201ENST00000440466 518 ntBASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 IGHV3-42-201ENST00000520410 361 ntBASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 AC005498.2-205ENST00000593218 784 ntBASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 AC011467.4-201ENST00000594891 528 ntBASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 AP005117.1-202ENST00000581724 1908 ntBASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TTC39BQ5VTQ0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 AC097493.3-201ENST00000509725 367 ntBASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 AL589739.1-201ENST00000607720 493 ntBASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 AL133215.2-201ENST00000609242 977 ntBASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 SPDYE12P-201ENST00000618416 771 ntBASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC39BQ5VTQ0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TTC39BQ5VTQ0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TTC39BQ5VTQ0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 AC126177.1-201ENST00000547829 2218 ntBASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 PKD1P5-201ENST00000532415 10291 ntBASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.64■□□□□ 0.25
TTC39BQ5VTQ0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms