Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AL607033.1-201ENST00000623900 1599 ntBASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AC092473.1-201ENST00000441098 221 ntBASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 CROCCP4-201ENST00000457096 498 ntBASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 BRI3BPP1-201ENST00000594224 787 ntBASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 MIR6805-201ENST00000615055 62 ntBASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNFT1Q5M7Z0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 PRORSD1P-202ENST00000563365 2154 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 AL442647.2-201ENST00000429864 857 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 AC119751.2-201ENST00000504529 210 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 SLED1-202ENST00000512051 380 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 SNX29P1-201ENST00000548357 1007 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 AL359711.2-201ENST00000563105 872 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RNFT1Q5M7Z0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.29□□□□□ -0.12
RNFT1Q5M7Z0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms