Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC074338.1-201ENST00000416825 156 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 HSPB1P2-201ENST00000448722 546 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 NUP210P1-202ENST00000504322 710 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 RN7SL774P-201ENST00000577467 290 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC132938.4-201ENST00000623835 848 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 REXO1L8P-201ENST00000604378 1897 ntBASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AL590640.2-201ENST00000457038 527 ntBASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC073352.2-201ENST00000609385 439 ntBASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC145423.3-201ENST00000615987 467 ntBASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC009084.3-201ENST00000623356 437 ntBASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AC006453.4-201ENST00000636949 1252 ntBASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RSPO4Q2I0M5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 AZGP1P1-201ENST00000411909 902 ntBASIC15.31■□□□□ 0.04
RSPO4Q2I0M5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms