Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC3A1Q07837 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 VN2R19P-201ENST00000442399 1052 ntBASIC14.46□□□□□ -0.09
SLC3A1Q07837 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC3A1Q07837 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC3A1Q07837 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC3A1Q07837 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC3A1Q07837 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC3A1Q07837 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC3A1Q07837 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC3A1Q07837 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC3A1Q07837 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SLC3A1Q07837 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.45□□□□□ -0.1
SLC3A1Q07837 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.45□□□□□ -0.1
SLC3A1Q07837 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 AC040169.1-201ENST00000565382 521 ntBASIC14.45□□□□□ -0.1
SLC3A1Q07837 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC3A1Q07837 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC3A1Q07837 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC3A1Q07837 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC3A1Q07837 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC3A1Q07837 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SLC3A1Q07837 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SLC3A1Q07837 AC020658.6-201ENST00000623564 1870 ntBASIC14.44□□□□□ -0.1
SLC3A1Q07837 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC3A1Q07837 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC3A1Q07837 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms