Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDK3Q00526 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.65■□□□□ 0.1
CDK3Q00526 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK3Q00526 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.65■□□□□ 0.1
CDK3Q00526 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.65■□□□□ 0.1
CDK3Q00526 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.65■□□□□ 0.1
CDK3Q00526 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDK3Q00526 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK3Q00526 SLED1-202ENST00000512051 380 ntBASIC15.65■□□□□ 0.1
CDK3Q00526 AC005225.4-201ENST00000557330 545 ntBASIC15.65■□□□□ 0.1
CDK3Q00526 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CDK3Q00526 RARRES2P5-201ENST00000564013 466 ntBASIC15.65■□□□□ 0.1
CDK3Q00526 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 AC012645.4-201ENST00000610691 1061 ntBASIC15.65■□□□□ 0.1
CDK3Q00526 FER1L4-210ENST00000615531 5998 ntBASIC15.65■□□□□ 0.1
CDK3Q00526 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDK3Q00526 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK3Q00526 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDK3Q00526 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK3Q00526 AL603832.2-201ENST00000566195 2125 ntBASIC15.65■□□□□ 0.1
CDK3Q00526 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDK3Q00526 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK3Q00526 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK3Q00526 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK3Q00526 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CDK3Q00526 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDK3Q00526 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
CDK3Q00526 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 AC024909.3-201ENST00000611513 2257 ntBASIC15.64■□□□□ 0.09
CDK3Q00526 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDK3Q00526 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK3Q00526 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 KRT18P64-201ENST00000434946 1219 ntBASIC15.64■□□□□ 0.09
CDK3Q00526 RN7SL692P-201ENST00000464677 288 ntBASIC15.64■□□□□ 0.09
CDK3Q00526 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK3Q00526 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.64■□□□□ 0.09
CDK3Q00526 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK3Q00526 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK3Q00526 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK3Q00526 AC007431.3-201ENST00000623221 587 ntBASIC15.64■□□□□ 0.09
CDK3Q00526 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK3Q00526 AL358472.5-202ENST00000641448 1267 ntBASIC15.64■□□□□ 0.09
CDK3Q00526 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDK3Q00526 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK3Q00526 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CDK3Q00526 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CDK3Q00526 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
CDK3Q00526 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK3Q00526 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK3Q00526 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.63■□□□□ 0.09
CDK3Q00526 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK3Q00526 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK3Q00526 AL596325.1-201ENST00000563991 1082 ntBASIC15.63■□□□□ 0.09
CDK3Q00526 RRP7BP-205ENST00000566851 833 ntBASIC15.63■□□□□ 0.09
CDK3Q00526 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.63■□□□□ 0.09
CDK3Q00526 AC008494.3-201ENST00000606615 944 ntBASIC15.63■□□□□ 0.09
CDK3Q00526 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.63■□□□□ 0.09
CDK3Q00526 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK3Q00526 AL158212.4-201ENST00000624062 1286 ntBASIC15.63■□□□□ 0.09
CDK3Q00526 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK3Q00526 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms