Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.11■□□□□ 0.33
SMAD3P84022 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD3P84022 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
SMAD3P84022 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.11■□□□□ 0.33
SMAD3P84022 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.11■□□□□ 0.33
SMAD3P84022 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.11■□□□□ 0.33
SMAD3P84022 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.11■□□□□ 0.33
SMAD3P84022 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD3P84022 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD3P84022 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SMAD3P84022 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD3P84022 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD3P84022 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD3P84022 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD3P84022 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD3P84022 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD3P84022 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD3P84022 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD3P84022 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD3P84022 AC015818.8-201ENST00000587907 1519 ntBASIC17.11■□□□□ 0.33
SMAD3P84022 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMAD3P84022 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD3P84022 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
SMAD3P84022 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.1■□□□□ 0.33
SMAD3P84022 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.1■□□□□ 0.33
SMAD3P84022 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMAD3P84022 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.1■□□□□ 0.33
SMAD3P84022 RN7SL720P-201ENST00000488178 304 ntBASIC17.1■□□□□ 0.33
SMAD3P84022 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.1■□□□□ 0.33
SMAD3P84022 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.1■□□□□ 0.33
SMAD3P84022 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.1■□□□□ 0.33
SMAD3P84022 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD3P84022 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD3P84022 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.1■□□□□ 0.33
SMAD3P84022 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMAD3P84022 MIR4321-201ENST00000592276 80 ntBASIC17.1■□□□□ 0.33
SMAD3P84022 AC097724.1-201ENST00000609581 426 ntBASIC17.1■□□□□ 0.33
SMAD3P84022 CU633904.3-201ENST00000624042 1029 ntBASIC17.1■□□□□ 0.33
SMAD3P84022 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD3P84022 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMAD3P84022 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD3P84022 AL031731.1-201ENST00000642131 2094 ntBASIC17.09■□□□□ 0.33
SMAD3P84022 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD3P84022 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD3P84022 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.09■□□□□ 0.33
SMAD3P84022 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMAD3P84022 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.09■□□□□ 0.33
SMAD3P84022 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.09■□□□□ 0.33
SMAD3P84022 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 AC245884.6-201ENST00000515672 1067 ntBASIC17.09■□□□□ 0.33
SMAD3P84022 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.09■□□□□ 0.33
SMAD3P84022 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD3P84022 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.09■□□□□ 0.33
SMAD3P84022 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD3P84022 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD3P84022 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD3P84022 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
SMAD3P84022 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.08■□□□□ 0.33
SMAD3P84022 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMAD3P84022 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.08■□□□□ 0.33
SMAD3P84022 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms