Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CBX1P83916 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CBX1P83916 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 CA15P1-201ENST00000481698 905 ntBASIC16.73■□□□□ 0.27
CBX1P83916 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX1P83916 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.73■□□□□ 0.27
CBX1P83916 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.73■□□□□ 0.27
CBX1P83916 AL109923.1-201ENST00000618799 583 ntBASIC16.73■□□□□ 0.27
CBX1P83916 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX1P83916 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX1P83916 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX1P83916 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CBX1P83916 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CBX1P83916 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX1P83916 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CBX1P83916 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX1P83916 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 AC015909.5-201ENST00000624336 2266 ntBASIC16.72■□□□□ 0.27
CBX1P83916 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CBX1P83916 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CBX1P83916 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CBX1P83916 AL353807.1-201ENST00000427475 662 ntBASIC16.72■□□□□ 0.27
CBX1P83916 MFAP1P1-201ENST00000442257 1255 ntBASIC16.72■□□□□ 0.27
CBX1P83916 AC026366.1-201ENST00000488803 879 ntBASIC16.72■□□□□ 0.27
CBX1P83916 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.72■□□□□ 0.27
CBX1P83916 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CBX1P83916 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX1P83916 AC152010.1-201ENST00000415779 2006 ntBASIC16.72■□□□□ 0.27
CBX1P83916 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.72■□□□□ 0.27
CBX1P83916 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX1P83916 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CBX1P83916 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.71■□□□□ 0.27
CBX1P83916 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CBX1P83916 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CBX1P83916 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX1P83916 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 AC010654.1-201ENST00000615722 808 ntBASIC16.71■□□□□ 0.27
CBX1P83916 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX1P83916 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX1P83916 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms