Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 MIR600HG-201ENST00000449175 5984 ntBASIC16.18■□□□□ 0.18
PRAMEP78395 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEP78395 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 AC144831.1-201ENST00000573312 2656 ntBASIC16.17■□□□□ 0.18
PRAMEP78395 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEP78395 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 AL592309.1-201ENST00000443127 649 ntBASIC16.17■□□□□ 0.18
PRAMEP78395 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.17■□□□□ 0.18
PRAMEP78395 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.17■□□□□ 0.18
PRAMEP78395 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.17■□□□□ 0.18
PRAMEP78395 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 MIR3687-2-201ENST00000577708 61 ntBASIC16.17■□□□□ 0.18
PRAMEP78395 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 MIR3687-1-201ENST00000614492 61 ntBASIC16.17■□□□□ 0.18
PRAMEP78395 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PRAMEP78395 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRAMEP78395 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.17■□□□□ 0.18
PRAMEP78395 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEP78395 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PRAMEP78395 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
PRAMEP78395 FAM220BP-201ENST00000377689 816 ntBASIC16.16■□□□□ 0.18
PRAMEP78395 HLA-H-201ENST00000383620 1096 ntBASIC16.16■□□□□ 0.18
PRAMEP78395 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEP78395 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEP78395 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEP78395 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEP78395 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEP78395 AC061975.2-201ENST00000581722 295 ntBASIC16.16■□□□□ 0.18
PRAMEP78395 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEP78395 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEP78395 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.16■□□□□ 0.18
PRAMEP78395 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.16■□□□□ 0.18
PRAMEP78395 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.16■□□□□ 0.18
PRAMEP78395 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms