Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 SPDYE19P-201ENST00000338590 713 ntBASIC16.81■□□□□ 0.28
USP46P62068 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 FO393414.2-201ENST00000405153 598 ntBASIC16.81■□□□□ 0.28
USP46P62068 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.81■□□□□ 0.28
USP46P62068 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.81■□□□□ 0.28
USP46P62068 EEF1DP4-201ENST00000446006 880 ntBASIC16.81■□□□□ 0.28
USP46P62068 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.81■□□□□ 0.28
USP46P62068 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 API5-211ENST00000534695 560 ntTSL 5 BASIC16.81■□□□□ 0.28
USP46P62068 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.81■□□□□ 0.28
USP46P62068 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.81■□□□□ 0.28
USP46P62068 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.81■□□□□ 0.28
USP46P62068 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.81■□□□□ 0.28
USP46P62068 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.81■□□□□ 0.28
USP46P62068 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP46P62068 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 KRT8P37-201ENST00000451609 1420 ntBASIC16.8■□□□□ 0.28
USP46P62068 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.8■□□□□ 0.28
USP46P62068 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.8■□□□□ 0.28
USP46P62068 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.8■□□□□ 0.28
USP46P62068 DOC2GP-202ENST00000514950 1163 ntBASIC16.8■□□□□ 0.28
USP46P62068 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.8■□□□□ 0.28
USP46P62068 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.8■□□□□ 0.28
USP46P62068 SRD5A3P1-201ENST00000603021 949 ntBASIC16.8■□□□□ 0.28
USP46P62068 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.8■□□□□ 0.28
USP46P62068 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
USP46P62068 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 TSPY26P-202ENST00000565928 3884 ntBASIC16.8■□□□□ 0.28
USP46P62068 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP46P62068 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
USP46P62068 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
USP46P62068 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP46P62068 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
USP46P62068 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.79■□□□□ 0.28
USP46P62068 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USP46P62068 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
USP46P62068 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 HAUS4P1-201ENST00000406739 1145 ntBASIC16.79■□□□□ 0.28
USP46P62068 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.79■□□□□ 0.28
USP46P62068 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.79■□□□□ 0.28
USP46P62068 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
USP46P62068 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.79■□□□□ 0.28
USP46P62068 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.79■□□□□ 0.28
USP46P62068 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 AC025048.6-201ENST00000634326 1161 ntBASIC16.79■□□□□ 0.28
USP46P62068 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.79■□□□□ 0.28
USP46P62068 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP46P62068 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.79■□□□□ 0.28
USP46P62068 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
USP46P62068 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms