Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CDC42P60953 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDC42P60953 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 RNU1-129P-201ENST00000384064 167 ntBASIC14.67□□□□□ -0.06
CDC42P60953 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDC42P60953 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.67□□□□□ -0.06
CDC42P60953 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 MIR3909-201ENST00000579518 119 ntBASIC14.67□□□□□ -0.06
CDC42P60953 U1.21-201ENST00000580816 167 ntBASIC14.67□□□□□ -0.06
CDC42P60953 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDC42P60953 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC42P60953 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDC42P60953 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC42P60953 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDC42P60953 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 CICP23-201ENST00000605013 2741 ntBASIC14.66□□□□□ -0.06
CDC42P60953 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDC42P60953 PMS2P4-201ENST00000412466 1052 ntBASIC14.66□□□□□ -0.06
CDC42P60953 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.66□□□□□ -0.06
CDC42P60953 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.66□□□□□ -0.06
CDC42P60953 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.66□□□□□ -0.06
CDC42P60953 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.66□□□□□ -0.06
CDC42P60953 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 AC093724.1-201ENST00000448659 1027 ntBASIC14.66□□□□□ -0.06
CDC42P60953 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.66□□□□□ -0.06
CDC42P60953 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 AL031055.1-201ENST00000606362 631 ntBASIC14.66□□□□□ -0.06
CDC42P60953 AL732292.2-201ENST00000609649 430 ntBASIC14.66□□□□□ -0.06
CDC42P60953 AC092119.3-201ENST00000612618 583 ntBASIC14.66□□□□□ -0.06
CDC42P60953 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CDC42P60953 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC42P60953 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC42P60953 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms