Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 KRT8P44-201ENST00000441609 1350 ntBASIC13.78□□□□□ -0.2
AP3S2P59780 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.78□□□□□ -0.2
AP3S2P59780 SLC22A20-204ENST00000530038 1673 ntBASIC13.78□□□□□ -0.2
AP3S2P59780 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP3S2P59780 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP3S2P59780 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
AP3S2P59780 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S2P59780 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S2P59780 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP3S2P59780 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.77□□□□□ -0.21
AP3S2P59780 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 PMS2P1-201ENST00000431037 1228 ntBASIC13.77□□□□□ -0.21
AP3S2P59780 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.77□□□□□ -0.21
AP3S2P59780 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.77□□□□□ -0.21
AP3S2P59780 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
AP3S2P59780 AL160237.2-201ENST00000556165 472 ntBASIC13.77□□□□□ -0.21
AP3S2P59780 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 AF228730.7-201ENST00000641842 219 ntBASIC13.77□□□□□ -0.21
AP3S2P59780 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
AP3S2P59780 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.77□□□□□ -0.21
AP3S2P59780 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
AP3S2P59780 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP3S2P59780 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.76□□□□□ -0.21
AP3S2P59780 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
AP3S2P59780 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.76□□□□□ -0.21
AP3S2P59780 AL645929.1-201ENST00000420084 975 ntBASIC13.76□□□□□ -0.21
AP3S2P59780 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.76□□□□□ -0.21
AP3S2P59780 AC087163.2-201ENST00000457299 853 ntBASIC13.76□□□□□ -0.21
AP3S2P59780 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
AP3S2P59780 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.76□□□□□ -0.21
AP3S2P59780 AC139887.4-201ENST00000607877 719 ntBASIC13.76□□□□□ -0.21
AP3S2P59780 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms