Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 MIR346-201ENST00000362234 95 ntBASIC15.2■□□□□ 0.02
CLDN8P56748 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CLDN8P56748 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 MED15P5-201ENST00000423150 992 ntBASIC15.2■□□□□ 0.02
CLDN8P56748 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN8P56748 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 FDX1P1-201ENST00000449115 551 ntBASIC15.2■□□□□ 0.02
CLDN8P56748 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN8P56748 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 AC009090.5-201ENST00000624886 2285 ntBASIC15.2■□□□□ 0.02
CLDN8P56748 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN8P56748 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 AL136982.4-201ENST00000437689 1740 ntBASIC15.2■□□□□ 0.02
CLDN8P56748 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CLDN8P56748 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN8P56748 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN8P56748 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN8P56748 C18orf15-201ENST00000623680 2534 ntBASIC15.19■□□□□ 0.02
CLDN8P56748 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN8P56748 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN8P56748 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDN8P56748 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CLDN8P56748 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN8P56748 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 RN7SL589P-201ENST00000481268 310 ntBASIC15.19■□□□□ 0.02
CLDN8P56748 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN8P56748 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 SLC25A1P1-201ENST00000528351 927 ntBASIC15.19■□□□□ 0.02
CLDN8P56748 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.19■□□□□ 0.02
CLDN8P56748 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.19■□□□□ 0.02
CLDN8P56748 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 AC092902.6-201ENST00000641783 218 ntBASIC15.19■□□□□ 0.02
CLDN8P56748 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CLDN8P56748 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN8P56748 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN8P56748 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN8P56748 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN8P56748 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN8P56748 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN8P56748 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN8P56748 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN8P56748 AC099063.4-201ENST00000641099 1602 ntBASIC15.18■□□□□ 0.02
CLDN8P56748 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN8P56748 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN8P56748 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CLDN8P56748 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms