Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN6P56747 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDN6P56747 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN6P56747 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 AC005915.1-201ENST00000624912 2018 ntBASIC15.27■□□□□ 0.04
CLDN6P56747 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN6P56747 TARDBPP1-201ENST00000442013 1203 ntBASIC15.27■□□□□ 0.04
CLDN6P56747 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN6P56747 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN6P56747 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN6P56747 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.27■□□□□ 0.04
CLDN6P56747 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN6P56747 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN6P56747 AC103810.3-201ENST00000583567 96 ntBASIC15.27■□□□□ 0.04
CLDN6P56747 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CLDN6P56747 BRI3BPP1-201ENST00000594224 787 ntBASIC15.27■□□□□ 0.04
CLDN6P56747 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN6P56747 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN6P56747 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN6P56747 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 RNF216P1-203ENST00000404404 2427 ntBASIC15.27■□□□□ 0.03
CLDN6P56747 AC006538.1-201ENST00000567905 1585 ntBASIC15.27■□□□□ 0.03
CLDN6P56747 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CLDN6P56747 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CLDN6P56747 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
CLDN6P56747 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLDN6P56747 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN6P56747 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN6P56747 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN6P56747 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CLDN6P56747 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN6P56747 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN6P56747 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 FO681548.1-201ENST00000455617 1132 ntBASIC15.26■□□□□ 0.03
CLDN6P56747 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN6P56747 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN6P56747 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN6P56747 PTP4A1P2-201ENST00000546033 454 ntBASIC15.26■□□□□ 0.03
CLDN6P56747 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms