Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXG1P55316 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.97□□□□□ -0.17
FOXG1P55316 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXG1P55316 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.97□□□□□ -0.17
FOXG1P55316 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXG1P55316 LINC02084-201ENST00000606069 1096 ntBASIC13.97□□□□□ -0.17
FOXG1P55316 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXG1P55316 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 AC132872.4-202ENST00000622924 2756 ntBASIC13.97□□□□□ -0.17
FOXG1P55316 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 AL365203.3-201ENST00000609742 2057 ntBASIC13.97□□□□□ -0.17
FOXG1P55316 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXG1P55316 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXG1P55316 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FOXG1P55316 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 SPTLC1P1-201ENST00000447199 261 ntBASIC13.96□□□□□ -0.17
FOXG1P55316 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXG1P55316 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXG1P55316 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FOXG1P55316 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXG1P55316 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.96□□□□□ -0.17
FOXG1P55316 MIR4313-201ENST00000580760 101 ntBASIC13.96□□□□□ -0.17
FOXG1P55316 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 MIR3197-201ENST00000582241 73 ntBASIC13.96□□□□□ -0.17
FOXG1P55316 AC138761.1-201ENST00000584393 385 ntBASIC13.96□□□□□ -0.17
FOXG1P55316 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXG1P55316 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXG1P55316 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXG1P55316 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
FOXG1P55316 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXG1P55316 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXG1P55316 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.96□□□□□ -0.18
FOXG1P55316 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXG1P55316 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXG1P55316 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXG1P55316 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXG1P55316 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXG1P55316 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXG1P55316 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXG1P55316 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FOXG1P55316 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
FOXG1P55316 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXG1P55316 BTBD7P1-201ENST00000447253 1453 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms