Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAD23BP54727 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAD23BP54727 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.09■□□□□ 0.33
RAD23BP54727 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD23BP54727 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RAD23BP54727 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD23BP54727 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.09■□□□□ 0.33
RAD23BP54727 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.09■□□□□ 0.33
RAD23BP54727 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RAD23BP54727 AC107890.1-201ENST00000422478 521 ntBASIC17.09■□□□□ 0.33
RAD23BP54727 EEF1DP4-201ENST00000446006 880 ntBASIC17.09■□□□□ 0.33
RAD23BP54727 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.09■□□□□ 0.33
RAD23BP54727 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.09■□□□□ 0.33
RAD23BP54727 DUX4L27-201ENST00000554796 1261 ntBASIC17.09■□□□□ 0.33
RAD23BP54727 AL079307.3-201ENST00000556114 283 ntBASIC17.09■□□□□ 0.33
RAD23BP54727 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RAD23BP54727 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAD23BP54727 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
RAD23BP54727 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAD23BP54727 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.08■□□□□ 0.33
RAD23BP54727 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.08■□□□□ 0.33
RAD23BP54727 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.08■□□□□ 0.33
RAD23BP54727 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAD23BP54727 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.08■□□□□ 0.33
RAD23BP54727 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.08■□□□□ 0.33
RAD23BP54727 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.08■□□□□ 0.32
RAD23BP54727 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RAD23BP54727 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 RPL37AP1-201ENST00000412502 279 ntBASIC17.08■□□□□ 0.32
RAD23BP54727 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.08■□□□□ 0.32
RAD23BP54727 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.08■□□□□ 0.32
RAD23BP54727 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.08■□□□□ 0.32
RAD23BP54727 AL589739.1-201ENST00000607720 493 ntBASIC17.08■□□□□ 0.32
RAD23BP54727 AC106028.4-201ENST00000614509 607 ntBASIC17.08■□□□□ 0.32
RAD23BP54727 SPDYE12P-201ENST00000618416 771 ntBASIC17.08■□□□□ 0.32
RAD23BP54727 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
RAD23BP54727 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAD23BP54727 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAD23BP54727 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAD23BP54727 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAD23BP54727 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAD23BP54727 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.08■□□□□ 0.32
RAD23BP54727 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.07■□□□□ 0.32
RAD23BP54727 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.07■□□□□ 0.32
RAD23BP54727 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 KRT8P37-201ENST00000451609 1420 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 KRT8P12-202ENST00000472924 1397 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.07■□□□□ 0.32
RAD23BP54727 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 CETN4P-206ENST00000642099 2168 ntBASIC17.07■□□□□ 0.32
RAD23BP54727 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAD23BP54727 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAD23BP54727 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms