Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LBX1P52954 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 AL592076.1-201ENST00000424448 303 ntBASIC17.62■□□□□ 0.41
LBX1P52954 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 LYPLA2P1-203ENST00000447689 696 ntBASIC17.62■□□□□ 0.41
LBX1P52954 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.62■□□□□ 0.41
LBX1P52954 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.62■□□□□ 0.41
LBX1P52954 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.62■□□□□ 0.41
LBX1P52954 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.62■□□□□ 0.41
LBX1P52954 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.62■□□□□ 0.41
LBX1P52954 SNORD3B-2-202ENST00000571722 791 ntBASIC17.62■□□□□ 0.41
LBX1P52954 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.62■□□□□ 0.41
LBX1P52954 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LBX1P52954 AC005632.3-201ENST00000605544 308 ntBASIC17.62■□□□□ 0.41
LBX1P52954 AC073592.2-201ENST00000623062 780 ntBASIC17.62■□□□□ 0.41
LBX1P52954 AC073911.3-201ENST00000624401 631 ntBASIC17.62■□□□□ 0.41
LBX1P52954 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.62■□□□□ 0.41
LBX1P52954 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LBX1P52954 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.62■□□□□ 0.41
LBX1P52954 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LBX1P52954 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LBX1P52954 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 BAK1P1-201ENST00000317045 636 ntBASIC17.61■□□□□ 0.41
LBX1P52954 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LBX1P52954 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.61■□□□□ 0.41
LBX1P52954 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 BCAS2P2-201ENST00000425064 674 ntBASIC17.61■□□□□ 0.41
LBX1P52954 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.61■□□□□ 0.41
LBX1P52954 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.61■□□□□ 0.41
LBX1P52954 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
LBX1P52954 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 AC026803.1-201ENST00000569130 274 ntBASIC17.61■□□□□ 0.41
LBX1P52954 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.61■□□□□ 0.41
LBX1P52954 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LBX1P52954 AC092299.1-201ENST00000632679 757 ntBASIC17.61■□□□□ 0.41
LBX1P52954 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LBX1P52954 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 FAM90A2P-201ENST00000511144 1395 ntBASIC17.61■□□□□ 0.41
LBX1P52954 FAM90A25P-201ENST00000528404 1395 ntBASIC17.61■□□□□ 0.41
LBX1P52954 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.61■□□□□ 0.41
LBX1P52954 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LBX1P52954 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.61■□□□□ 0.41
LBX1P52954 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LBX1P52954 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LBX1P52954 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.6■□□□□ 0.41
LBX1P52954 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms