Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PCP4P48539 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.68□□□□□ -0.7
PCP4P48539 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PCP4P48539 AC124319.4-201ENST00000622931 2161 ntBASIC10.67□□□□□ -0.7
PCP4P48539 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 C8B-206ENST00000543257 2382 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PCP4P48539 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PCP4P48539 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 EI24-212ENST00000615917 1407 ntTSL 2 BASIC10.67□□□□□ -0.7
PCP4P48539 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.66□□□□□ -0.7
PCP4P48539 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
PCP4P48539 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 LINC02447-202ENST00000501888 2146 ntBASIC10.66□□□□□ -0.7
PCP4P48539 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC10.66□□□□□ -0.7
PCP4P48539 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PCP4P48539 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.66□□□□□ -0.7
PCP4P48539 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PCP4P48539 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms