Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.65■□□□□ 0.26
MMP13P45452 AP000842.3-202ENST00000569238 1080 ntBASIC16.65■□□□□ 0.26
MMP13P45452 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MMP13P45452 AC055717.3-201ENST00000622967 595 ntBASIC16.65■□□□□ 0.26
MMP13P45452 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MMP13P45452 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.65■□□□□ 0.26
MMP13P45452 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.65■□□□□ 0.26
MMP13P45452 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 UXT-AS1-201ENST00000590504 1525 ntBASIC16.65■□□□□ 0.26
MMP13P45452 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MMP13P45452 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 CICP24-201ENST00000605464 2705 ntBASIC16.64■□□□□ 0.25
MMP13P45452 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MMP13P45452 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MMP13P45452 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 AC142381.1-201ENST00000426099 345 ntBASIC16.64■□□□□ 0.25
MMP13P45452 AC004967.1-201ENST00000453589 447 ntBASIC16.64■□□□□ 0.25
MMP13P45452 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP13P45452 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP13P45452 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 AC134684.3-201ENST00000641758 218 ntBASIC16.64■□□□□ 0.25
MMP13P45452 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP13P45452 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP13P45452 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.64■□□□□ 0.25
MMP13P45452 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP13P45452 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP13P45452 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
MMP13P45452 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP13P45452 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP13P45452 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP13P45452 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP13P45452 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP13P45452 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 MIR346-201ENST00000362234 95 ntBASIC16.63■□□□□ 0.25
MMP13P45452 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP13P45452 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP13P45452 AC005237.2-201ENST00000434368 219 ntBASIC16.63■□□□□ 0.25
MMP13P45452 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 AC098859.1-201ENST00000502915 1238 ntBASIC16.63■□□□□ 0.25
MMP13P45452 SPTSSB-204ENST00000617024 1292 ntBASIC16.63■□□□□ 0.25
MMP13P45452 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP13P45452 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 FOXO1B-201ENST00000504678 1527 ntBASIC16.63■□□□□ 0.25
MMP13P45452 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP13P45452 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP13P45452 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP13P45452 FER1L4-210ENST00000615531 5998 ntBASIC16.63■□□□□ 0.25
MMP13P45452 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP13P45452 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP13P45452 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms