Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.85□□□□□ -0.67
CXCL5P42830 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.85□□□□□ -0.67
CXCL5P42830 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CXCL5P42830 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 PRAL-201ENST00000624952 3286 ntBASIC10.85□□□□□ -0.67
CXCL5P42830 AC020658.6-201ENST00000623564 1870 ntBASIC10.85□□□□□ -0.67
CXCL5P42830 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CXCL5P42830 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
CXCL5P42830 AC087386.2-201ENST00000623212 4637 ntBASIC10.85□□□□□ -0.67
CXCL5P42830 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 AC011477.6-201ENST00000604980 1927 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.84□□□□□ -0.67
CXCL5P42830 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.84□□□□□ -0.67
CXCL5P42830 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.84□□□□□ -0.67
CXCL5P42830 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 RPS15P9-201ENST00000494093 319 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
CXCL5P42830 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC10.84□□□□□ -0.67
CXCL5P42830 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 AC008608.2-201ENST00000606089 416 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 AC091076.1-201ENST00000610741 619 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 AL121772.3-201ENST00000610840 674 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.84□□□□□ -0.67
CXCL5P42830 MIR1199-201ENST00000621445 119 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 AC008677.1-201ENST00000519230 1561 ntBASIC10.84□□□□□ -0.67
CXCL5P42830 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
CXCL5P42830 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CXCL5P42830 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.84□□□□□ -0.67
CXCL5P42830 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CXCL5P42830 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CXCL5P42830 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
CXCL5P42830 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CXCL5P42830 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.83□□□□□ -0.68
CXCL5P42830 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CXCL5P42830 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CXCL5P42830 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.83□□□□□ -0.68
CXCL5P42830 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CXCL5P42830 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.83□□□□□ -0.68
CXCL5P42830 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.83□□□□□ -0.68
CXCL5P42830 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CXCL5P42830 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms