Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPA3P35244 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPA3P35244 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RPA3P35244 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPA3P35244 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPA3P35244 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RPA3P35244 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.2■□□□□ 0.18
RPA3P35244 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
RPA3P35244 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.19■□□□□ 0.18
RPA3P35244 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RPA3P35244 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 HMGA1P7-201ENST00000406908 502 ntBASIC16.19■□□□□ 0.18
RPA3P35244 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.19■□□□□ 0.18
RPA3P35244 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.19■□□□□ 0.18
RPA3P35244 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.19■□□□□ 0.18
RPA3P35244 AL671883.3-201ENST00000603274 991 ntBASIC16.19■□□□□ 0.18
RPA3P35244 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.19■□□□□ 0.18
RPA3P35244 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 AL513190.1-201ENST00000621254 727 ntBASIC16.19■□□□□ 0.18
RPA3P35244 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 AC092127.1-201ENST00000567093 3455 ntBASIC16.19■□□□□ 0.18
RPA3P35244 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.19■□□□□ 0.18
RPA3P35244 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.19■□□□□ 0.18
RPA3P35244 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPA3P35244 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RPA3P35244 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.18■□□□□ 0.18
RPA3P35244 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.18■□□□□ 0.18
RPA3P35244 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.18■□□□□ 0.18
RPA3P35244 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.18■□□□□ 0.18
RPA3P35244 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.18■□□□□ 0.18
RPA3P35244 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
RPA3P35244 PDPK2P-202ENST00000562415 1191 ntBASIC16.18■□□□□ 0.18
RPA3P35244 AC002347.1-201ENST00000569543 541 ntBASIC16.18■□□□□ 0.18
RPA3P35244 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 AC092865.6-201ENST00000642101 219 ntBASIC16.18■□□□□ 0.18
RPA3P35244 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.18■□□□□ 0.18
RPA3P35244 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPA3P35244 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.18■□□□□ 0.18
RPA3P35244 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPA3P35244 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPA3P35244 AC011477.6-201ENST00000604980 1927 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms