Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CD40LGP29965 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CD40LGP29965 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CD40LGP29965 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 AL645929.1-201ENST00000420084 975 ntBASIC14.23□□□□□ -0.13
CD40LGP29965 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 AC092597.1-201ENST00000487352 616 ntBASIC14.23□□□□□ -0.13
CD40LGP29965 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.23□□□□□ -0.13
CD40LGP29965 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CD40LGP29965 AC010331.1-201ENST00000611423 582 ntBASIC14.23□□□□□ -0.13
CD40LGP29965 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 AL359881.3-201ENST00000602640 1721 ntBASIC14.23□□□□□ -0.13
CD40LGP29965 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CD40LGP29965 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD40LGP29965 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40LGP29965 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 MIR662-201ENST00000384847 95 ntBASIC14.22□□□□□ -0.13
CD40LGP29965 KRT18P38-201ENST00000449496 1282 ntBASIC14.22□□□□□ -0.13
CD40LGP29965 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.22□□□□□ -0.13
CD40LGP29965 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.22□□□□□ -0.13
CD40LGP29965 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.22□□□□□ -0.13
CD40LGP29965 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.22□□□□□ -0.13
CD40LGP29965 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.22□□□□□ -0.13
CD40LGP29965 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 TCAF1P1-201ENST00000414990 2232 ntBASIC14.22□□□□□ -0.13
CD40LGP29965 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.22□□□□□ -0.13
CD40LGP29965 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms