Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL5A1P20908 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.03■□□□□ -0
COL5A1P20908 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.03■□□□□ -0
COL5A1P20908 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
COL5A1P20908 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 KRT8P35-201ENST00000483942 1338 ntBASIC15.03■□□□□ -0
COL5A1P20908 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
COL5A1P20908 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.03■□□□□ -0
COL5A1P20908 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.03■□□□□ -0
COL5A1P20908 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.03■□□□□ -0
COL5A1P20908 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 AC105129.2-201ENST00000559536 390 ntBASIC15.03■□□□□ -0
COL5A1P20908 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.03■□□□□ -0
COL5A1P20908 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.03■□□□□ -0
COL5A1P20908 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.03■□□□□ -0
COL5A1P20908 AC015967.2-201ENST00000624092 234 ntBASIC15.03■□□□□ -0
COL5A1P20908 AC006435.4-201ENST00000625037 234 ntBASIC15.03■□□□□ -0
COL5A1P20908 AL356737.1-201ENST00000634391 234 ntBASIC15.03■□□□□ -0
COL5A1P20908 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.03■□□□□ -0
COL5A1P20908 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.03■□□□□ -0
COL5A1P20908 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL5A1P20908 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.02■□□□□ -0
COL5A1P20908 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.02■□□□□ -0
COL5A1P20908 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.02■□□□□ -0
COL5A1P20908 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
COL5A1P20908 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
COL5A1P20908 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.02■□□□□ -0
COL5A1P20908 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.02■□□□□ -0
COL5A1P20908 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.02■□□□□ -0
COL5A1P20908 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
COL5A1P20908 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 AC079178.1-201ENST00000420915 656 ntBASIC15.02■□□□□ -0
COL5A1P20908 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.02■□□□□ -0
COL5A1P20908 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
COL5A1P20908 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 AL096828.3-201ENST00000615354 462 ntBASIC15.02■□□□□ -0
COL5A1P20908 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
COL5A1P20908 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL5A1P20908 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.02■□□□□ -0
COL5A1P20908 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.02□□□□□ -0.01
COL5A1P20908 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 AHCYP2-201ENST00000430630 1300 ntBASIC15.02□□□□□ -0.01
COL5A1P20908 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.02□□□□□ -0.01
COL5A1P20908 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL5A1P20908 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL5A1P20908 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.01□□□□□ -0.01
COL5A1P20908 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms