Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NTF3P20783 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.24□□□□□ -0.45
NTF3P20783 LINC00552-201ENST00000625151 2579 ntBASIC12.24□□□□□ -0.45
NTF3P20783 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.23□□□□□ -0.45
NTF3P20783 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 REXO1L8P-201ENST00000604378 1897 ntBASIC12.23□□□□□ -0.45
NTF3P20783 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
NTF3P20783 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.23□□□□□ -0.45
NTF3P20783 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 TSPY5P-201ENST00000426936 936 ntBASIC12.23□□□□□ -0.45
NTF3P20783 TSPY22P-201ENST00000427496 604 ntBASIC12.23□□□□□ -0.45
NTF3P20783 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
NTF3P20783 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.23□□□□□ -0.45
NTF3P20783 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.23□□□□□ -0.45
NTF3P20783 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.23□□□□□ -0.45
NTF3P20783 HYMAI.1-201ENST00000620949 238 ntBASIC12.23□□□□□ -0.45
NTF3P20783 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.23□□□□□ -0.45
NTF3P20783 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NTF3P20783 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.23□□□□□ -0.45
NTF3P20783 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NTF3P20783 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NTF3P20783 AL512652.2-201ENST00000625156 1716 ntBASIC12.23□□□□□ -0.45
NTF3P20783 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NTF3P20783 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.22□□□□□ -0.45
NTF3P20783 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
NTF3P20783 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.22□□□□□ -0.45
NTF3P20783 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.22□□□□□ -0.45
NTF3P20783 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
NTF3P20783 AC232323.1-201ENST00000540724 2099 ntBASIC12.22□□□□□ -0.45
NTF3P20783 REXO1L5P-201ENST00000622260 2098 ntBASIC12.22□□□□□ -0.45
NTF3P20783 AL031731.1-201ENST00000642131 2094 ntBASIC12.22□□□□□ -0.45
NTF3P20783 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NTF3P20783 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NTF3P20783 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.22□□□□□ -0.45
NTF3P20783 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.22□□□□□ -0.45
NTF3P20783 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms