Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC26.65■■□□□ 1.86
CFTRP13569 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC26.65■■□□□ 1.86
CFTRP13569 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC26.64■■□□□ 1.86
CFTRP13569 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CFTRP13569 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC26.64■■□□□ 1.86
CFTRP13569 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 MIR648-201ENST00000385046 94 ntBASIC26.64■■□□□ 1.86
CFTRP13569 NPM1P43-201ENST00000558669 786 ntBASIC26.64■■□□□ 1.86
CFTRP13569 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC26.64■■□□□ 1.86
CFTRP13569 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CFTRP13569 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CFTRP13569 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC26.64■■□□□ 1.85
CFTRP13569 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CFTRP13569 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CFTRP13569 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC26.63■■□□□ 1.85
CFTRP13569 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC26.63■■□□□ 1.85
CFTRP13569 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC26.63■■□□□ 1.85
CFTRP13569 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC26.63■■□□□ 1.85
CFTRP13569 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 AL353770.1-201ENST00000614915 403 ntBASIC26.63■■□□□ 1.85
CFTRP13569 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC26.63■■□□□ 1.85
CFTRP13569 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CFTRP13569 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CFTRP13569 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CFTRP13569 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC26.62■■□□□ 1.85
CFTRP13569 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC26.62■■□□□ 1.85
CFTRP13569 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC26.62■■□□□ 1.85
CFTRP13569 MIR3147-201ENST00000577811 66 ntBASIC26.62■■□□□ 1.85
CFTRP13569 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 KRT8P4-201ENST00000509735 1454 ntBASIC26.62■■□□□ 1.85
CFTRP13569 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CFTRP13569 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.62■■□□□ 1.85
CFTRP13569 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC26.62■■□□□ 1.85
CFTRP13569 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 AL627389.1-201ENST00000413508 1182 ntBASIC26.62■■□□□ 1.85
CFTRP13569 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 AC106794.1-201ENST00000506935 792 ntBASIC26.62■■□□□ 1.85
CFTRP13569 LY6E-208ENST00000520531 490 ntTSL 2 BASIC26.62■■□□□ 1.85
CFTRP13569 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC26.62■■□□□ 1.85
CFTRP13569 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CFTRP13569 AC068587.8-201ENST00000641239 219 ntBASIC26.62■■□□□ 1.85
CFTRP13569 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC26.61■■□□□ 1.85
CFTRP13569 AL158070.2-201ENST00000623713 1621 ntBASIC26.61■■□□□ 1.85
CFTRP13569 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CFTRP13569 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC26.61■■□□□ 1.85
CFTRP13569 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CFTRP13569 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CFTRP13569 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 AMT-224ENST00000635808 1610 ntTSL 5 BASIC26.61■■□□□ 1.85
CFTRP13569 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CFTRP13569 Z97180.1-201ENST00000445173 988 ntBASIC26.61■■□□□ 1.85
CFTRP13569 RN7SL181P-201ENST00000462921 277 ntBASIC26.61■■□□□ 1.85
CFTRP13569 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC26.61■■□□□ 1.85
CFTRP13569 MIR4750-201ENST00000584564 56 ntBASIC26.61■■□□□ 1.85
CFTRP13569 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC26.61■■□□□ 1.85
CFTRP13569 AC073352.2-201ENST00000609385 439 ntBASIC26.61■■□□□ 1.85
CFTRP13569 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms