Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV3-43DP0DP04 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
IGHV3-43DP0DP04 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV3-43DP0DP04 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV3-43DP0DP04 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV3-43DP0DP04 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 AC092850.2-201ENST00000623821 2697 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 ALG1L5P-201ENST00000482043 771 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 KRT8P48-201ENST00000515599 1220 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 RNA5SP410-201ENST00000516285 106 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PGAM5P1-201ENST00000518923 814 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 FOXO1B-201ENST00000504678 1527 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 AC073347.1-201ENST00000421633 2643 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV3-43DP0DP04 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV3-43DP0DP04 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms